usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 43.815724137931 75.0524137931034 90.3678620689655
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2013
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 644
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 644
Number of spheres polar: 134, nonpolar: 440, out of current total: 644
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 34.30298 53.80340 65.16860 85.02025 80.38960 100.02987
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 319
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 266
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 179
Spheres center of coords (x y z): 42.4567879329609 77.0620540782123 90.5610094972067
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.19056111030789
Final number of output spheres is: 60
Number of polar spheres: 8
Number of nonpolar spheres: 44
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 29