usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): -18.9384444444444 2.879 3.17092592592593
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1690
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 648
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 648
Number of spheres polar: 169, nonpolar: 443, out of current total: 648
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -28.91165 -8.94300 -7.08153 12.77701 -6.79883 13.04185
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 182
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 139
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 82
Spheres center of coords (x y z): -18.7395396341463 2.97631256097561 2.90573707317073
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 2.39152441921031
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 27