usefragsph not on
There are 22 ligand heavy atoms
Ligand center of coords (x y z): 62.6592727272727 46.8705 30.9573636363636
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1768
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 557
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 557
Number of spheres polar: 127, nonpolar: 411, out of current total: 557
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 52.69182 72.64627 36.87100 56.84683 21.00460 40.89902
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 293
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 247
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 170
Spheres center of coords (x y z): 62.2304038823529 47.2063127647059 30.3097645294118
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 2.94879017439667
Final number of output spheres is: 60
Number of polar spheres: 8
Number of nonpolar spheres: 52
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 22