usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): -4.9393 104.1404 22.84285
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1554
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 577
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 577
Number of spheres polar: 193, nonpolar: 324, out of current total: 577
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.87986 5.01403 94.14068 114.09800 12.84286 32.75924
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 333
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 275
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 138
Spheres center of coords (x y z): -5.7649065942029 103.955718913043 22.1750455797101
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 2.39960507565108
Final number of output spheres is: 60
Number of polar spheres: 8
Number of nonpolar spheres: 37
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 20