Enabling DOCK Developer Scripts incl Database Preparation Intel/Linux inactives we got past inactivesDB.ism actives we got past actives.ism node-4-22.c.bkslab.org du2 starts 1 molecule processed, 0 errors first try already in then inzinc count is 0 bzcat: Can't open input file 53: No such file or directory. bzcat: Can't open input file 41: No such file or directory. convert.py (Tripos MOL2 -> MDL SDF): mols in: 1 mols out: 1 Total: 1 mols processed. count is 0 nothing to compress bzcat: Can't open input file 53: No such file or directory. bzcat: Can't open input file 41: No such file or directory. nothing to compress du2.csh script updated ligand processing MakeDOCK 2.0, modified by J.Irwin and M.Mysinger. Previous versions by D.M.Lorber, B.Q.Wei, A.N.Kirschner, and N.Huang Using scripts in /raid5/people/mysinger/xyz/dockenv. Creating binding-site residue list Creating molecular surface real 0m5.277s user 0m0.638s sys 0m1.060s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0: 802 spheres. 164. 164. 164. 164. 164. 164. 164. 382. 382. 382. 382. 382. 382. 382. 391. 391. 391. 391. 391. 396. 399. 399. 399. 399. 399. 399. 399. 399. 399. 399. 399. 399. 399. 399. 401. 415. 415. 415. 416. 416. 422. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 423. 430. 430. 430. 430. 430. 430. 431. 432. 432. 432. 432. 432. 432. 432. 432. 432. 432. 432. 446. 446. 451. 451. 451. 451. 566. 566. 567. 567. 567. 567. 567. 567. 567. 567. 567. 567. 567. 567. 568. 568. 571. 571. 571. 572. 577. 577. 577. 577. 577. 577. 577. 577. 577. 577. 577. 581. 581. 581. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 587. 609. 610. 616. 616. 616. 616. 616. 616. 621. 621. 621. 621. 621. 621. 624. 624. 625. 625. 625. 625. 625. 625. 626. 627. 628. 992. 993. 993. 993. 993. 993. 997. 997. 997. 997. 997. 999. 999. 999. 999. 999. 999. 999. 999. 999. 999. 999. 999. 999.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1000.1166.1166.1168.1173.1173.1173.1173.1173.1173.1173.1173.1173.1173.1173.1174.1174.1174.1179.1182.1182.1182.1182.1182.1182.1182.1182.1182.1184.1184.1184.1188.1188.1188.1188.1189.1189.1189.1189.1198.1198.1198.1198.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1199.1354.1354.1354.1392.1392.1392.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1397.1398.1398.1398.1398.1398.1398.1398.1424.1433.1441.1441.1441.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1442.1446.1446.1447.1447.1447.1447.1451.1451.1451.1454.1486.1486.1486.1486.1486.1486.1486.1667.1667.2143.2145.2145.2145.2145.2145.2145.2145.2145.2145.2145.2145.2145.2146.2148.2148.2150.2152.2152.2152.2153.2153.2153.2153.2153.2153.2155.2155.2155.2155.2155.2155.2155.2156.2156.2156.2156.2156.2158.2158.2158.2158.2158.2158.2158.2158.2160.2160.2160.2160.2160.2160.2160.2160.2160.2161.2161.2161.2161.2161.2161.2162.2162.2162.2162.2404.2410.2410.2410.2410.2424.2424.2424.2424.2424.2426.2427.2427.2427.2427.2427.2427.2427.2428.2428.2428.2428.2428.2428.2428.2428.2428.2428.2432.2440.2440.2440.2440.2441.2441.2442.2442.2442.2442.2442.2442.2442.2442.2442.2442.2442.2442.2442.2442.2442.2442.2445.2447.2447.2447.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2448.2449.2449.2449.2449.2449.2449.2450.2450.2450.2450.2450.2450.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2451.2455.2455.2455.2455.2455.2455.2455.2455.2455.2455.2455.2455.2455.2456.2456.2456.2456.2459.2459.2459.2461.2461.2461.2464.2464.2467.2467.2467.2467.2467.2467.2467.2467.2467.2467.2467.2470.2470.2470.2470.2470.2470.2470.2470.2470.2470.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2471.2472.2472.2472.2477.2477.2477.2477.2478.2478.2478.2478.2479.2483.2483.2483.2483.2483.2483.2483.2483.2483.2483.2483.2483.2486.2486.2486.2486.2486.2486.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2495.2503.2503.2503.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2504.2535.2535.2535.2535.3417.3417.3417.3417.3417.3417.3417.3417.3417.3417.3417.3417.3417.3417.3419.3419.3419.3419.3419.3419.3419.3419.3419.3419.3419.3419.3419.3419.3424.3425.3425.3425.3425.3428.3428.3428.3428.3428.3428.3428.3428.3432.3432.3432.3432.3432.3438.3438.3438.3439.3439.3442.3445.3446.3446.3446.3451.3451.3451.3452.3452.3452.3452.3452.3452.3452.3452.3452.3453.3453.3453.3453.3453.3454.3454.3454.3454.3456.3456.3456.3456.3456.3456.3456.3456.3456.3456.3456.3456.3457.FORTRAN STOP Converting ligand atoms to spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 17 spheres. 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17.FORTRAN STOP Adding essential hydrogens to receptor Generating matching spheres for delphi Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 90 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.9046.9047.9048.9049.9050.9051.9052.9053.9054.9055.9056.9057.9058.9059.9060.9061.9062.9063.9064.9065.9066.9067.9068.9069.9070.9071.9072.9073.9074.9075.9076.9077.9078.9079.9080.9081.9082.9083.9084.9085.9086.9087.9088.9089.9090.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 38 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.FORTRAN STOP Coloring matching spheres Generating slower matching3 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 60 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.9046.9047.9048.9049.9050.9051.9052.9053.9054.9055.9056.9057.9058.9059.9060.FORTRAN STOP Coloring matching spheres Adding spheres to electrostatic grid we were asked to cook * CE * * CE* 22 we were asked to cook * S * * S* 22 Creating DelPhi electrostatic grid real 0m35.907s user 0m33.046s sys 0m1.393s Adding spheres to tarted electrostatic grid we were asked to cook * CE * * CE* 22 we were asked to cook * S * * S* 22 Creating DelPhi electrostatic grid real 0m36.147s user 0m33.584s sys 0m1.390s Creating box around spheres we were asked to cook * CE * * CE* 22 we were asked to cook * S * * S* 22 Creating chemgrid maps real 1m50.946s user 1m49.830s sys 0m0.504s Atomic solvent excluded volume calculations underway FORTRAN STOP real 31m16.742s user 31m15.507s sys 0m0.375s Checking for WARNINGS in OUTPARM. Checking for WARNINGS in delphi.log. End of MakeDOCK sphere and grid generation. Grid preparation completed normally. not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 65, in ? result = server.qsubset(data, 'db') File "/usr/lib/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib/python2.4/xmlrpclib.py", line 1129, in request self.send_content(h, request_body) File "/usr/lib/python2.4/xmlrpclib.py", line 1243, in send_content connection.endheaders() File "/usr/lib/python2.4/httplib.py", line 804, in endheaders self._send_output() File "/usr/lib/python2.4/httplib.py", line 685, in _send_output self.send(msg) File "/usr/lib/python2.4/httplib.py", line 652, in send self.connect() File "/usr/lib/python2.4/httplib.py", line 636, in connect raise socket.error, msg socket.error: (111, 'Connection refused') slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar not ready slept 360 waiting for similar failed to get similars