There are 17 ligand heavy atoms Ligand center of coords (x y z): 22.0807647058824 58.506 55.0891176470588 useligsph not on Starting number of spheres from sph/sph cluster 0: 802 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 607 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 607 Number of spheres polar: 300, nonpolar: 229, out of current total: 607 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 10.09205 34.01603 46.61414 69.82783 43.23526 66.98024 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 185 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 141 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 22.0807647058824 58.506 55.0891176470588 Center point: 4 xyz: 21.46465 58.86399 55.33704 Only 36 spheres are continuous, so increasing continuity by 0.5 to be 3.5 Only 36 spheres are continuous, so increasing continuity by 0.5 to be 4 After continuity checking, number of spheres is: 90 Final number of output spheres is: 90 Number of polar spheres: 44 Number of nonpolar spheres: 29 Number of spheres that are near neither polar nor nonpolar receptor atoms: 17 Final number of spheres that are from crystallographic ligand: 0