usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 7.72108695652174 -37.2898695652174 29.7656086956522
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1657
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 966
WARNING: removing a crystallographic sphere that is distance 0.887619851062375 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 1.12566691343399 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 1.14849684370485 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 938
Number of spheres polar: 244, nonpolar: 395, out of current total: 938
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.20076 17.71695 -47.22623 -27.60540 20.12326 39.68153
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 558
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 496
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 484
Spheres center of coords (x y z): 9.30889758264463 -38.899084338843 29.608831446281
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.86553840755795
Final number of output spheres is: 60
Number of polar spheres: 26
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 20