usefragsph not on
There are 37 ligand heavy atoms
Ligand center of coords (x y z): -2.79764864864865 -33.2358378378378 7.56843243243243
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2030
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1039
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1039
Number of spheres polar: 302, nonpolar: 600, out of current total: 1039
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.75907 7.70600 -43.23477 -23.54216 -2.28108 17.54809
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 523
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 461
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 429
Spheres center of coords (x y z): -1.43453270396271 -35.393026993007 6.68222580419581
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.63449637413533
Final number of output spheres is: 60
Number of polar spheres: 18
Number of nonpolar spheres: 39
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 37