usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 7.71333333333333 -6.42481481481481 -4.49585185185185
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1940
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 926
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 926
Number of spheres polar: 268, nonpolar: 448, out of current total: 926
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.26891 17.55845 -16.40846 3.51326 -14.44255 5.41899
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 507
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 431
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 406
Spheres center of coords (x y z): 5.75833369458128 -9.7356933497537 -2.26424125615763
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.98246578929105
Final number of output spheres is: 60
Number of polar spheres: 29
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 27