usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): -5.36304347826087 -6.90230434782609 -37.7099130434783
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1576
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 903
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 903
Number of spheres polar: 241, nonpolar: 425, out of current total: 903
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -15.32449 4.57636 -16.88056 3.07167 -47.62975 -27.98410
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 305
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 257
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 240
Spheres center of coords (x y z): -7.48262458333333 -9.16620904166667 -40.474556125
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.07306822829419
Final number of output spheres is: 45
Number of polar spheres: 14
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 23