usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 3.24004347826087 -25.5745652173913 -31.9706956521739
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1403
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 744
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 743
Number of spheres polar: 187, nonpolar: 410, out of current total: 743
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.71716 13.22890 -35.53460 -15.68821 -41.90519 -22.05157
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 422
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 364
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 330
Spheres center of coords (x y z): 5.58080687878788 -23.7428916666667 -31.1000804242424
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.20208501516548
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 42
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 23