There are 20 ligand heavy atoms Ligand center of coords (x y z): -5.07925 6.36335 -6.6189 useligsph not on Starting number of spheres from sph/sph cluster 0: 1251 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 932 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 931 Number of spheres polar: 302, nonpolar: 436, out of current total: 931 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -17.05923 6.85813 -5.48659 18.31000 -18.44528 5.29341 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 369 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 300 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -5.07925 6.36335 -6.6189 Center point: 65 xyz: -5.20000 6.57797 -6.25367 After continuity checking, number of spheres is: 230 Spheres center of coords (x y z): -2.60641926086957 8.46666734782609 -4.91790813043478 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -2.03802515479876 5.82969156346749 1.10061726006192 Average weighted-distance for final elimination is: 26.2729942222022 Final number of output spheres is: 120 Number of polar spheres: 37 Number of nonpolar spheres: 49 Number of spheres that are near neither polar nor nonpolar receptor atoms: 34 Final number of spheres that are from crystallographic ligand: 0