usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): -4.10810526315789 34.1678421052632 -7.82271052631579
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2005
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1012
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1009
Number of spheres polar: 217, nonpolar: 650, out of current total: 1009
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.08459 5.87616 24.27861 44.10595 -17.56041 2.04647
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 528
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 450
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 431
Spheres center of coords (x y z): -2.78852053364269 37.0207099535963 -7.00619083526683
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.41143431975567
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 37
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 38