usefragsph not on
There are 46 ligand heavy atoms
Ligand center of coords (x y z): 6.93730434782609 33.9514347826087 8.14428260869565
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2106
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1060
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1060
Number of spheres polar: 276, nonpolar: 594, out of current total: 1060
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.85200 16.90913 23.95324 43.94941 -1.83836 18.09313
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 348
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 289
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 46
Spheres center of coords (x y z): 6.93730434782609 33.9514347826087 8.14428260869565
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.65809289024797
WARNING: removing a crystallographic sphere since 46>45 max spheres are present
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 45