usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 7.69908695652174 -6.71469565217391 -4.47126086956522
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1790
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1079
WARNING: removing a crystallographic sphere that is distance 0.933814221352406 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 0.597133150980583 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 1.19263825194398 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1055
Number of spheres polar: 240, nonpolar: 502, out of current total: 1055
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.25471 17.69281 -16.71370 2.62374 -14.25115 5.50263
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 605
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 537
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 507
Spheres center of coords (x y z): 6.97236877712032 -9.41344033530572 -3.23851151873767
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.49894415428346
Final number of output spheres is: 60
Number of polar spheres: 13
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 20