usefragsph not on
There are 11 ligand heavy atoms
Ligand center of coords (x y z): 37.3164545454545 6.27272727272727 17.264
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 709
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 515
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 512
Number of spheres polar: 135, nonpolar: 242, out of current total: 512
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 27.39581 47.16019 -2.53752 15.17026 7.26939 27.18716
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 215
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 184
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 177
Spheres center of coords (x y z): 39.3929550847458 6.072217740113 18.9645301129944
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.80189138653182
Final number of output spheres is: 45
Number of polar spheres: 14
Number of nonpolar spheres: 16
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 11