usefragsph not on
There are 11 ligand heavy atoms
Ligand center of coords (x y z): 38.0494545454545 6.26290909090909 17.386
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 621
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 376
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 371
Number of spheres polar: 83, nonpolar: 153, out of current total: 371
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 28.20580 48.04159 -2.68589 13.69539 7.40981 27.27259
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 173
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 151
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 133
Spheres center of coords (x y z): 39.7473881203008 6.37718721804511 19.1819298496241
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.2477367265041
Final number of output spheres is: 45
Number of polar spheres: 16
Number of nonpolar spheres: 13
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 11