There are 15 ligand heavy atoms Ligand center of coords (x y z): 16.7758 26.9870666666667 19.0526666666667 useligsph not on Starting number of spheres from sph/sph cluster 0: 619 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 542 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 541 Number of spheres polar: 203, nonpolar: 221, out of current total: 541 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 4.93186 23.78627 17.65856 38.94820 7.08212 30.79645 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 230 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 191 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 16.7758 26.9870666666667 19.0526666666667 Center point: 17 xyz: 16.20171 27.58751 19.51842 After continuity checking, number of spheres is: 86 Final number of output spheres is: 86 Number of polar spheres: 29 Number of nonpolar spheres: 25 Number of spheres that are near neither polar nor nonpolar receptor atoms: 32 Final number of spheres that are from crystallographic ligand: 0