usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): 19.6117317073171 21.7974146341464 21.2782682926829
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 909
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 466
WARNING: removing a crystallographic sphere that is distance 1.05320463348772 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 461
Number of spheres polar: 167, nonpolar: 177, out of current total: 461
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 9.83180 29.18255 11.82450 31.78942 11.29135 31.20113
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 292
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 259
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 237
Spheres center of coords (x y z): 19.2962885232067 22.8777141772152 21.7392035864979
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.4249722821357
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 40