usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 17.21115 27.4193 17.5823
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 670
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 453
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 451
Number of spheres polar: 193, nonpolar: 159, out of current total: 451
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.18533 24.21420 17.84976 36.92942 7.63012 27.50711
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 279
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 244
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 157
Spheres center of coords (x y z): 16.8477878980892 28.8723677070064 20.7689826751592
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.28045263639051
Final number of output spheres is: 60
Number of polar spheres: 28
Number of nonpolar spheres: 18
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 20