usefragsph not on
There are 6 ligand heavy atoms
Ligand center of coords (x y z): 15.9116666666667 28.325 17.7363333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 549
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 419
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 419
Number of spheres polar: 149, nonpolar: 204, out of current total: 419
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.92032 22.59797 19.05816 38.21388 7.75564 27.72103
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 262
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 219
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 131
Spheres center of coords (x y z): 16.8081427480916 28.8893139694656 21.9483786259542
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.2065671318496
Final number of output spheres is: 60
Number of polar spheres: 18
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 6