usefragsph not on
There are 15 ligand heavy atoms
Ligand center of coords (x y z): 17.2304666666667 27.5194 17.3646
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 710
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 496
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 496
Number of spheres polar: 150, nonpolar: 238, out of current total: 496
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.14499 25.49723 17.55034 37.00822 7.38475 27.23229
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 305
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 268
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 153
Spheres center of coords (x y z): 16.9349743137255 29.4973313071895 20.5025164705882
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.79709067405557
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 15