usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 2.43161538461538 7.8825 4.21857692307692
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1315
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 815
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 814
Number of spheres polar: 249, nonpolar: 384, out of current total: 814
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.51626 12.38571 -2.10166 17.71416 -5.77724 14.20900
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 287
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 228
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 208
Spheres center of coords (x y z): -0.0427013461538464 6.66020754807691 5.42809413461538
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.32964910169569
Final number of output spheres is: 45
Number of polar spheres: 14
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 26