usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 16.0351111111111 66.3851111111111 5.75988888888889
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1496
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 789
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 789
Number of spheres polar: 261, nonpolar: 386, out of current total: 789
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 6.04970 26.03351 56.45877 76.35798 -4.20422 15.73298
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 435
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 363
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 298
Spheres center of coords (x y z): 19.8721729194631 66.3679568791947 7.37512298657717
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.89200210099194
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 27