usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): 12.6012285714286 46.1066857142857 20.2286571428571
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1444
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 856
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 856
Number of spheres polar: 304, nonpolar: 344, out of current total: 856
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 2.67095 22.19633 36.12882 55.10708 10.31500 29.97693
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 290
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 223
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 203
Spheres center of coords (x y z): 12.5891861083744 44.3211475862069 21.4366375369458
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.041081397229
Final number of output spheres is: 45
Number of polar spheres: 14
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 35