usefragsph not on
There are 9 ligand heavy atoms
Ligand center of coords (x y z): 12.0557777777778 -11.7288888888889 22.9037777777778
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 830
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 648
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 645
Number of spheres polar: 232, nonpolar: 267, out of current total: 645
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 2.08066 21.82680 -21.66056 -4.87839 12.94636 32.84800
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 318
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 264
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 202
Spheres center of coords (x y z): 14.8845345544554 -15.1065361386138 19.1848658910891
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.58116912185121
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 9