usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 17.84 -14.925358974359 23.2210256410256
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 976
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 502
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 501
Number of spheres polar: 158, nonpolar: 217, out of current total: 501
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.29507 26.71875 -23.51439 -4.96966 13.34472 33.15390
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 188
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 162
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 154
Spheres center of coords (x y z): 17.7000416883117 -15.8606041558442 22.6066755844156
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.73134279777139
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 39