usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): 29.2058333333333 45.8518666666667 28.0455333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1147
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 686
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 682
Number of spheres polar: 193, nonpolar: 348, out of current total: 682
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.26799 39.15134 35.85726 54.98700 18.08756 38.03614
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 384
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 345
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 289
Spheres center of coords (x y z): 29.1085251557093 47.1449078546713 25.6216598961938
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.65687121018977
Final number of output spheres is: 60
Number of polar spheres: 23
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 30