usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 13.6620476190476 17.9862380952381 18.251
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1179
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 719
WARNING: removing a crystallographic sphere that is distance 0.785780503703166 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 717
Number of spheres polar: 274, nonpolar: 274, out of current total: 717
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.70197 23.54852 8.03890 25.18892 8.27621 28.07376
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 245
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 194
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 185
Spheres center of coords (x y z): 14.0929762162162 14.7976302702703 17.1575222162162
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.79548318681025
Final number of output spheres is: 45
Number of polar spheres: 30
Number of nonpolar spheres: 9
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 20