There are 40 ligand heavy atoms Ligand center of coords (x y z): 11.800825 35.435775 3.205675 useligsph not on Starting number of spheres from sph/sph cluster 0: 1624 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1055 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1049 Number of spheres polar: 442, nonpolar: 398, out of current total: 1049 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.18076 23.41415 23.50608 47.43189 -8.10554 15.10535 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 366 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 281 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 11.800825 35.435775 3.205675 Center point: 228 xyz: 12.36866 35.08964 3.99337 After continuity checking, number of spheres is: 203 Spheres center of coords (x y z): 11.7628981280788 35.9289718719212 2.24182305418719 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 21.2398213891952 37.9103439911797 12.8591855935318 Average weighted-distance for final elimination is: 32.2006811591881 Final number of output spheres is: 120 Number of polar spheres: 61 Number of nonpolar spheres: 37 Number of spheres that are near neither polar nor nonpolar receptor atoms: 22 Final number of spheres that are from crystallographic ligand: 0