usefragsph not on
There are 15 ligand heavy atoms
Ligand center of coords (x y z): 14.6479333333333 -12.1841333333333 21.0437333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1053
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 797
WARNING: removing a crystallographic sphere that is distance 0.482969978363044 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 796
Number of spheres polar: 317, nonpolar: 289, out of current total: 796
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.06990 24.32777 -22.01419 -4.20371 11.05404 30.85977
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 266
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 202
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 171
Spheres center of coords (x y z): 16.2974021637427 -15.0641550292398 19.7053397076023
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.37798257707132
Final number of output spheres is: 45
Number of polar spheres: 20
Number of nonpolar spheres: 14
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 14