usefragsph not on
There are 34 ligand heavy atoms
Ligand center of coords (x y z): 18.0864705882353 55.8787352941177 44.5363823529412
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2001
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1117
WARNING: removing a crystallographic sphere that is distance 1.08518431614173 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1116
Number of spheres polar: 355, nonpolar: 439, out of current total: 1116
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.21200 28.03715 45.88612 65.84830 34.58280 54.51159
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 592
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 504
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 480
Spheres center of coords (x y z): 18.7409045208333 52.3852110625 43.5684474375
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.84937954913701
Final number of output spheres is: 60
Number of polar spheres: 29
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 33