usefragsph not on
There are 16 ligand heavy atoms
Ligand center of coords (x y z): 8.0346875 22.0705 51.2211875
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1029
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 756
WARNING: removing a crystallographic sphere that is distance 1.02616226786995 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 755
Number of spheres polar: 313, nonpolar: 292, out of current total: 755
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.94576 17.99503 12.08702 29.11156 41.33976 61.19904
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 389
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 324
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 287
Spheres center of coords (x y z): 5.84042780487805 19.3427309059233 52.2790262369338
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.11726126340283
Final number of output spheres is: 60
Number of polar spheres: 32
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 15