usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): 5.17512121212121 20.3639090909091 49.0946666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1483
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 888
WARNING: removing a crystallographic sphere that is distance 1.00863769511158 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 883
Number of spheres polar: 300, nonpolar: 374, out of current total: 883
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.56473 15.16273 10.36886 30.35900 39.21437 59.05469
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 461
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 386
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 357
Spheres center of coords (x y z): 4.66141140056023 17.6732569747899 49.3532333613446
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.44884148771421
Final number of output spheres is: 60
Number of polar spheres: 29
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 32