name of input pdb file: rec.crg name of output contact grid file: solvmap_sev atomic radii (A): 1. for O N C S P Other [1.4 1.3 1.7 2.22.2 1.8]? 1.600000 1.650000 1.900000 1.900000 1.900000 1.600000 2. for water probe (exclusion) [1.4]? 1.400000 number of grid points/angstrom?(1-4) 2 pdb file of limiting box: box assumed ligand atomic radius (A): 1.400000 maximum receptor atomic radius (A): 1.900000 grid resolution (A): 0.5000000 integration cutoff (A): 10.00000 receptor minimum and maximum x y z (A): -4.323000 -1.933000 42.60600 40.34700 47.10700 91.60300 box minimum and maximum x y z (A): -1.226000 -1.171000 48.33000 42.15000 35.25600 83.74500 dielectric grid expansion size (points/edge) 13 8 18 3 20 20 dielectric grid minimum and maximum x y z (A): -7.726000 -5.171000 39.33000 43.65000 45.25600 93.74500 solvation grid x, y, z dimensions: 86 72 70 finished receptor accessible surface finished initializing dielectric grid finished creating receptor molecular surface grid dV is 9.9471835E-03 Precalculating solvmap lookup table Starting solvmap calculation. 1 / 71 the way there! 2 / 71 the way there! 3 / 71 the way there! 4 / 71 the way there! 5 / 71 the way there! 6 / 71 the way there! 7 / 71 the way there! 8 / 71 the way there! 9 / 71 the way there! 10 / 71 the way there! 11 / 71 the way there! 12 / 71 the way there! 13 / 71 the way there! 14 / 71 the way there! 15 / 71 the way there! 16 / 71 the way there! 17 / 71 the way there! 18 / 71 the way there! 19 / 71 the way there! 20 / 71 the way there! 21 / 71 the way there! 22 / 71 the way there! 23 / 71 the way there! 24 / 71 the way there! 25 / 71 the way there! 26 / 71 the way there! 27 / 71 the way there! 28 / 71 the way there! 29 / 71 the way there! 30 / 71 the way there! 31 / 71 the way there! 32 / 71 the way there! 33 / 71 the way there! 34 / 71 the way there! 35 / 71 the way there! 36 / 71 the way there! 37 / 71 the way there! 38 / 71 the way there! 39 / 71 the way there! 40 / 71 the way there! 41 / 71 the way there! 42 / 71 the way there! 43 / 71 the way there! 44 / 71 the way there! 45 / 71 the way there! 46 / 71 the way there! 47 / 71 the way there! 48 / 71 the way there! 49 / 71 the way there! 50 / 71 the way there! 51 / 71 the way there! 52 / 71 the way there! 53 / 71 the way there! 54 / 71 the way there! 55 / 71 the way there! 56 / 71 the way there! 57 / 71 the way there! 58 / 71 the way there! 59 / 71 the way there! 60 / 71 the way there! 61 / 71 the way there! 62 / 71 the way there! 63 / 71 the way there! 64 / 71 the way there! 65 / 71 the way there! 66 / 71 the way there! 67 / 71 the way there! 68 / 71 the way there! 69 / 71 the way there! 70 / 71 the way there! 71 / 71 the way there! successful completion elapsed time (sec): 1649.6100 Sun Oct 16 15:46:20 PDT 2011 rec.crg solvmap_sev 1.60,1.65,1.90,1.90,1.90,1.60 1.4 2 box 1.4 EOI # receptor file # output grid file # radii of oxygen, nitrogen, carbon, sulfur, phosphorus, and "other" atoms. # radius of probe # grid resolution # box file # born radius of ligand atom