usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): 25.2503 34.1195333333333 21.7143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 973
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 523
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 523
Number of spheres polar: 235, nonpolar: 212, out of current total: 523
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.25295 35.24575 24.28476 44.11162 11.73137 31.29329
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 266
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 217
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 173
Spheres center of coords (x y z): 24.340623699422 34.0520528901734 23.0228558381503
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.64405429584045
Final number of output spheres is: 60
Number of polar spheres: 28
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 30