usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 11.7386129032258 -13.6561290322581 12.398
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1329
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 796
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 788
Number of spheres polar: 309, nonpolar: 307, out of current total: 788
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 1.80894 21.70865 -23.51475 -3.69700 2.56566 22.38159
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 283
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 224
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 207
Spheres center of coords (x y z): 11.3643827536232 -16.3824637198068 12.4690447826087
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.66924274740266
Final number of output spheres is: 45
Number of polar spheres: 22
Number of nonpolar spheres: 19
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 31