usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): 139.483665666667 52.8353333333333 20.7004666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1090
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 671
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 671
Number of spheres polar: 345, nonpolar: 204, out of current total: 671
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 129.55591 149.00291 43.18400 62.76870 11.19389 30.60109
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 217
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 174
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 161
Spheres center of coords (x y z): 139.700821987578 54.9690160248447 21.1498309937888
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.43969904536839
Final number of output spheres is: 45
Number of polar spheres: 25
Number of nonpolar spheres: 17
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 30