usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 6.57439285714286 20.0738214285714 49.2818571428571
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1293
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 824
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 822
Number of spheres polar: 274, nonpolar: 351, out of current total: 822
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.40818 16.56329 10.09189 29.50543 39.40569 59.27238
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 283
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 225
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 190
Spheres center of coords (x y z): 5.36650594736842 18.2628005263158 50.977605
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.3050405649394
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 28