usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): -52.5133666666667 -16.7326 -20.5017
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1272
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 778
WARNING: removing a crystallographic sphere that is distance 1.00608200460996 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 772
Number of spheres polar: 284, nonpolar: 337, out of current total: 772
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -62.48780 -43.16285 -26.46620 -6.78923 -30.30626 -12.57224
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 257
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 193
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 146
Spheres center of coords (x y z): -53.8012482876712 -14.8793514383562 -21.2444600684932
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.18644070203413
Final number of output spheres is: 45
Number of polar spheres: 21
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 29