There are 6 ligand heavy atoms Ligand center of coords (x y z): 25.6221666666667 -2.76766666666667 1.375 useligsph not on Starting number of spheres from sph/sph cluster 0: 578 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 555 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 545 Number of spheres polar: 201, nonpolar: 198, out of current total: 545 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.26322 37.60625 -14.67185 8.98534 -8.28321 13.31450 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 233 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 184 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 25.6221666666667 -2.76766666666667 1.375 Center point: 29 xyz: 26.58142 -2.12956 2.36700 After continuity checking, number of spheres is: 137 Spheres center of coords (x y z): 26.4473858394161 -6.47630299270073 1.26777350364964 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 29.4102833491012 3.30904777672659 -6.04624266792811 Average weighted-distance for final elimination is: 28.0081850458651 Final number of output spheres is: 120 Number of polar spheres: 43 Number of nonpolar spheres: 32 Number of spheres that are near neither polar nor nonpolar receptor atoms: 45 Final number of spheres that are from crystallographic ligand: 0