There are 33 ligand heavy atoms Ligand center of coords (x y z): 17.1932424242424 -12.3972424242424 21.7308484848485 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 14809 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 8820 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 8820 Number of spheres polar: 4920, nonpolar: 3040, out of current total: 8820 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.19940 29.18900 -24.35180 -1.37280 9.73200 33.72820 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1048 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 633 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 614 Spheres center of coords (x y z): 17.3404114006515 -17.0368156351791 21.3287465798046 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 9.20342590036578 Final number of output spheres is: 120 Number of polar spheres: 55 Number of nonpolar spheres: 60 Number of spheres that are near neither polar nor nonpolar receptor atoms: 5 Final number of spheres that are from crystallographic ligand: 33