There are 32 ligand heavy atoms Ligand center of coords (x y z): -1.4385 30.99275 135.932655625 useligsph not on Starting number of spheres from sph/sph cluster 0: 470 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 398 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 398 Number of spheres polar: 62, nonpolar: 249, out of current total: 398 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -10.15235 10.47038 25.12829 42.90402 123.93277 140.26166 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 173 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 136 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -1.4385 30.99275 135.932655625 Center point: 50 xyz: -2.17825 32.29816 136.94894 After continuity checking, number of spheres is: 79 Final number of output spheres is: 79 Number of polar spheres: 3 Number of nonpolar spheres: 55 Number of spheres that are near neither polar nor nonpolar receptor atoms: 21 Final number of spheres that are from crystallographic ligand: 0