usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 50.2976666666667 59.1385555555555 44.8454814814815
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1022
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 515
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 515
Number of spheres polar: 164, nonpolar: 226, out of current total: 515
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 40.61283 60.19131 49.31037 69.07064 34.85771 54.75972
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 195
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 171
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 125
Spheres center of coords (x y z): 52.71496352 58.39194648 43.01246368
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.95079678765666
Final number of output spheres is: 45
Number of polar spheres: 11
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 27