usefragsph not on
There are 9 ligand heavy atoms
Ligand center of coords (x y z): 45.3538888888889 19.529 52.5758888888889
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 548
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 347
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 345
Number of spheres polar: 114, nonpolar: 146, out of current total: 345
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 36.35619 55.26285 10.14075 28.73681 42.63547 62.42640
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 201
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 174
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 147
Spheres center of coords (x y z): 47.3454798639456 23.8550976870748 51.6262170748299
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.0632452973877
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 9