usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 42.57352 23.03244 53.79812
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 743
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 414
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 408
Number of spheres polar: 130, nonpolar: 164, out of current total: 408
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.59264 52.55743 13.06631 32.69100 44.38084 63.70478
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 161
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 135
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 117
Spheres center of coords (x y z): 43.2669879487179 24.6533217094017 53.4756801709402
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.41528457569906
Final number of output spheres is: 45
Number of polar spheres: 14
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 25