usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 45.2235555555555 23.4066666666667 49.1345925925926
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 838
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 572
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 560
Number of spheres polar: 150, nonpolar: 254, out of current total: 560
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 35.44106 55.13300 16.35600 32.66521 39.20007 59.11424
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 214
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 184
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 175
Spheres center of coords (x y z): 46.5981877142857 25.4785906857143 48.2472599428571
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.08682495331154
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 27