usefragsph not on
There are 12 ligand heavy atoms
Ligand center of coords (x y z): 45.0955833333333 20.4728333333333 52.1389166666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 523
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 316
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 313
Number of spheres polar: 116, nonpolar: 140, out of current total: 313
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 35.48926 54.99425 10.95799 29.06800 42.14037 61.92824
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 176
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 154
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 100
Spheres center of coords (x y z): 45.527073 23.2703753 49.0715888
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.09341413287835
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 12