usefragsph not on
There are 13 ligand heavy atoms
Ligand center of coords (x y z): 45.8468461538462 20.5356153846154 52.5414615384615
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 546
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 366
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 366
Number of spheres polar: 126, nonpolar: 130, out of current total: 366
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 37.11959 55.52493 10.59371 29.92801 42.55881 62.46604
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 145
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 120
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 103
Spheres center of coords (x y z): 47.2692238834952 24.3406924271845 50.6741496116505
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.03872640075482
Final number of output spheres is: 45
Number of polar spheres: 17
Number of nonpolar spheres: 15
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 13