There are 12 ligand heavy atoms Ligand center of coords (x y z): 45.6613333333333 20.36625 52.4170833333333 useligsph not on Starting number of spheres from sph/sph cluster 0: 578 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 411 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 411 Number of spheres polar: 124, nonpolar: 152, out of current total: 411 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 34.91921 57.37998 8.46827 30.59270 40.46356 64.05775 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 170 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 135 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 45.6613333333333 20.36625 52.4170833333333 Center point: 69 xyz: 45.51129 20.35599 52.39015 After continuity checking, number of spheres is: 111 Final number of output spheres is: 111 Number of polar spheres: 24 Number of nonpolar spheres: 33 Number of spheres that are near neither polar nor nonpolar receptor atoms: 54 Final number of spheres that are from crystallographic ligand: 0